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diff orthologs/evolmap_output_exclude.xml @ 0:5b9a38ec4a39 draft default tip

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author osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date Tue, 11 Mar 2014 12:19:13 -0700
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/orthologs/evolmap_output_exclude.xml	Tue Mar 11 12:19:13 2014 -0700
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+<tool id="evolmap_output_exclude" name="EvolMAP Output Species Exclude">
+	<description>Modifies EvolMAP Output to exclude specific species.</description>
+	<command interpreter="perl">evolmap_output_exclude.pl $input $speciesList</command>
+	<inputs>
+		<param name="input" type="data" format="txt" label="EvolMAP Output generated file" />
+		<param name="speciesList" type="text" area="true" size="4x25" label="Species to exclude separated by commas with no space -- example: VolvoxCarteriFNagariensis,CoccomyxaSpC169" />
+	</inputs>
+	
+	<outputs>
+		<data from_work_dir="output.txt" format="txt" />
+	</outputs>
+	
+	<help>
+		http://labs.eemb.ucsb.edu/oakley/todd/
+		
+		Takes the output file of EvolMAP Output tool as input and deletes the user defined species from this file and is ouputted to a new text file.
+		
+		Input format:
+			Text (txt)
+		
+		Output format:
+			Text (txt)
+	</help>
+</tool>