Mercurial > repos > ucsb-phylogenetics > osiris_phylogenetics
view phylostatistics/tree_species.pl @ 0:5b9a38ec4a39 draft default tip
First commit of old repositories
author | osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> |
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date | Tue, 11 Mar 2014 12:19:13 -0700 |
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#!/usr/bin/perl use strict; my $infile=$ARGV[0]; my $treefile=$ARGV[1]; open IN, $infile or die "Cannot open $infile\n"; open TREE, $treefile or die "Cannot open $treefile\n"; my $tree = <TREE>; close(TREE); while(<IN>){ my $curspecies = $_; chomp($curspecies); $curspecies =~ s/ /\_/g ; if($tree =~ m/$curspecies/){ #match }else{ print $curspecies."\n"; } }