Mercurial > repos > ufz > phabox_cherry
comparison cherry.xml @ 1:965a49e82ed8 draft default tip
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phabox commit 52385539f64c4e46c2e8953588efa3ea01bb99fd
| author | ufz |
|---|---|
| date | Wed, 16 Apr 2025 09:43:25 +0000 |
| parents | bf17977c003f |
| children |
comparison
equal
deleted
inserted
replaced
| 0:bf17977c003f | 1:965a49e82ed8 |
|---|---|
| 25 <data name="out" format="tabular" from_work_dir="output/final_prediction/cherry_prediction.tsv"/> | 25 <data name="out" format="tabular" from_work_dir="output/final_prediction/cherry_prediction.tsv"/> |
| 26 </outputs> | 26 </outputs> |
| 27 <tests> | 27 <tests> |
| 28 <test> | 28 <test> |
| 29 <param name="dbdir" value="phaboxdb"/> | 29 <param name="dbdir" value="phaboxdb"/> |
| 30 <param name="contigs" value="example_contigs.fa"/> | 30 <param name="contigs" value="example_contigs.fa" location="https://github.com/KennthShang/PhaBOX/releases/download/v2/example_contigs.fa"/> |
| 31 <output name="out"> | 31 <output name="out"> |
| 32 <assert_contents> | 32 <assert_contents> |
| 33 <has_line line="Accession	Length	Host	CHERRYScore	Method	Host_NCBI_lineage	Host_GTDB_lineage"/> | 33 <has_line line="Accession	Length	Host	CHERRYScore	Method	Host_NCBI_lineage	Host_GTDB_lineage"/> |
| 34 <has_n_lines n="11"/> | 34 <has_n_lines n="391"/> |
| 35 <has_n_columns n="7"/> | 35 <has_n_columns n="7"/> |
| 36 </assert_contents> | 36 </assert_contents> |
| 37 </output> | 37 </output> |
| 38 </test> | 38 </test> |
| 39 </tests> | 39 </tests> |