Mercurial > repos > ufz > phabox_contamination

diff contamination.xml @ 1:94390e0d6791 draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phabox commit 52385539f64c4e46c2e8953588efa3ea01bb99fd
author ufz
date Wed, 16 Apr 2025 09:43:47 +0000
parents 3f73568fafdc
children
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--- a/contamination.xml	Tue Nov 12 09:30:43 2024 +0000
+++ b/contamination.xml	Wed Apr 16 09:43:47 2025 +0000
@@ -24,11 +24,11 @@
     <tests>
         <test>
             <param name="dbdir" value="phaboxdb"/>
-            <param name="contigs" value="example_contigs.fa"/>
+            <param name="contigs" value="example_contigs.fa" location="https://github.com/KennthShang/PhaBOX/releases/download/v2/example_contigs.fa"/>
             <output name="out">
                 <assert_contents>
                     <has_line line="Accession&#9;Length&#9;Total_genes&#9;Viral_genes&#9;Prokaryotic_genes&#9;Kmer_freq&#9;Contamination&#9;Provirus&#9;Pure_viral"/>
-                    <has_n_lines n="11"/>
+                    <has_n_lines n="391"/>
                     <has_n_columns n="9"/>
                 </assert_contents>
             </output>