Mercurial > repos > ufz > virsorter_build_database

diff data_manager_conf.xml @ 0:863ba94fb6e4 draft

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_virsorter commit fdde667342e69dd11ef98029e0d6d3376d0d95c7
author ufz
date Sun, 23 Jun 2024 16:48:31 +0000
parents
children c456ae8354f2
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Sun Jun 23 16:48:31 2024 +0000
@@ -0,0 +1,19 @@
+<data_managers>
+    <data_manager tool_file="data_manager/virsorter_datamanager.xml" id="virsorter_build_database">
+        <data_table name="virsorter">
+            <output>
+                <column name="value"/>
+                <column name="name"/>
+                <column name="virsorter_version"/>
+                <column name="path" output_ref="out_file">
+                    <move type="directory">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">virsorter/${path}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/virsorter/${path}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>