Mercurial > repos > ulfschaefer > package_python_2_7_pyvcf_0_6_7

comparison tool_dependencies.xml @ 0:f6d05f9a22bf draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author ulfschaefer
date Fri, 11 Dec 2015 09:34:42 -0500
parents
children ed025c662e59
comparison
equal deleted inserted replaced
-1:000000000000 0:f6d05f9a22bf
1 <?xml version='1.0' encoding='utf-8'?>
2 <tool_dependency>
3 <package name="python" version="2.7.10">
4 <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="pyvcf" version="0.6.7">
7 <install version="1.0">
8 <actions>
9 <action type="download_by_url">https://pypi.python.org/packages/source/P/PyVCF/PyVCF-0.6.7.tar.gz</action>
10 <action type="make_directory">$INSTALL_DIR/lib/python</action>
11 <action type="shell_command">
12 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
13 python setup.py install --install-lib $INSTALL_DIR/lib/python
14 </action>
15 <action type="set_environment">
16 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
17 <environment_variable action="set_to" name="PYTHONPATH_PYVCF">$INSTALL_DIR/lib/python</environment_variable>
18 </action>
19 </actions>
20 </install>
21 <readme>
22 This Galaxy Tool shed package installs pyvcf(https://pypi.python.org/pypi/PyVCF)
23 package for use with python 2.7.10.
24
25 The corresponding PYTHONPATH is accessible via PYTHONPATH_PYVCF
26 </readme>
27 </package>
28 </tool_dependency>