Mercurial > repos > urgi-team > gandalfworkflow

comparison tool_dependencies.xml @ 7:a6b557df86db draft

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author urgi-team
date Tue, 15 Dec 2015 05:35:36 -0500
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6:7557b71a92e7 7:a6b557df86db
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="VCF_Gandalf_Tools" version="1.0">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">https://urgi.versailles.inra.fr/download/gandalf/VCFtools-1.2.tar.gz</action>
7 <action type="shell_command">python setup_VCFtools.py install</action>
8 <action type="move_directory_files">
9 <source_directory>.</source_directory>
10 <destination_directory>$INSTALL_DIR</destination_directory>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR</environment_variable>
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
15 </action>
16 </actions>
17 </install>
18 </package>
19 </tool_dependency>