Mercurial > repos > vandelj > giant_aptsummarize

diff galaxy/wrappers/tool-data/aptTool.loc.sample @ 0:708f43bda2b6 draft

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"planemo upload for repository https://github.com/juliechevalier/GIANT/tree/master commit cb276a594444c8f32e9819fefde3a21f121d35df"
author vandelj
date Fri, 26 Jun 2020 09:35:11 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/galaxy/wrappers/tool-data/aptTool.loc.sample	Fri Jun 26 09:35:11 2020 -0400
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+#This file lists the locations of all files required by apt tool
+#under the "apt" directory (a directory that contains a directory
+#for each chip). This file has the TAB delimited format :
+#
+#<shortName> <fullName> <pathPGF> <pathCLF> <pathMPS> <pathBGP> <pathCDF> <pathAnnotTrans> <pathAnnotProbe> <versionInfo> 
+#
+#
+HTA2.0	HTA 2.0 arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/HTA2.0.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/HTA2.0.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/HTA2.0.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/HTA2.0.bgp	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/HTA2.0.cdf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/formatedAnnotation36.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/formatedAnnotation36.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HTA2.0/versionInfo.txt
+Mouse430A1.0	Mouse Genome 430A 1.0 arrays	null	null	null	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430A_1.0/Mouse430A_1.0.cdf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430A_1.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430A_1.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430A_1.0/versionInfo.txt
+Mouse430B1.0	Mouse Genome 430B 1.0 arrays	null	null	null	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430B_1.0/Mouse430B_1.0.cdf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430B_1.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430B_1.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430B_1.0/versionInfo.txt
+Mouse4302.0	Mouse Genome 430 2.0 arrays	null	null	null	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430_2.0/Mouse430_2.0.cdf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430_2.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430_2.0/formatedAnnotation.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MouseGenome430_2.0/versionInfo.txt
+MoGene1.0ST	Mouse Gene 1.0 ST arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/MoGene1.0ST.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/MoGene1.0ST.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/MoGene1.0ST.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/MoGene1.0ST.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.0ST/versionInfo.txt
+MoGene1.1ST	Mouse Gene 1.1 ST arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/MoGene1.1ST.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/MoGene1.1ST.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/MoGene1.1ST.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/MoGene1.1ST.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene1.1ST/versionInfo.txt
+MoGene2.0ST	Mouse Gene 2.0 ST arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/MoGene2.0ST.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/MoGene2.0ST.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/MoGene2.0ST.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/MoGene2.0ST.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MoGene2.0ST/versionInfo.txt
+MTA1.0	Mouse Transcriptome 1.0 arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/MTA1.0.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/MTA1.0.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/MTA1.0.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/MTA1.0.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/MTA1.0/versionInfo.txt
+HuGene1.0ST	Human Gene 1.0 ST arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/HuGene1.0ST.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/HuGene1.0ST.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/HuGene1.0ST.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/HuGene1.0ST.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene1.0ST/versionInfo.txt
+HuGene2.0ST	Human Gene 2.0 ST arrays	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/HuGene2.0ST.pgf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/HuGene2.0ST.clf	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/HuGene2.0ST.mps	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/HuGene2.0ST.bgp	null	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/formatedAnnotation.transcript.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/formatedAnnotation.probeset.csv	/home/galaxy/Data_Storage/Galaxy_tool-data/affyChipConfig/HuGene2.0ST/versionInfo.txt