Mercurial > repos > vimalkumarvelayudhan > riboplot
comparison docs/readme.rst @ 7:096c6bbf4a04
Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
| author | Vimalkumar Velayudhan <vimal@biotechcoder.com> |
|---|---|
| date | Thu, 13 Aug 2015 15:03:20 +0100 |
| parents | cef780bcce01 |
| children | 8964641b04ef |
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| 6:2ffa8172dce1 | 7:096c6bbf4a04 |
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| 1 ../README.rst | 1 =============================== |
| 2 RiboPlot | |
| 3 =============================== | |
| 4 | |
| 5 .. image:: https://img.shields.io/travis/vimalkumarvelayudhan/riboplot.svg | |
| 6 :target: https://travis-ci.org/vimalkumarvelayudhan/riboplot | |
| 7 | |
| 8 .. image:: https://img.shields.io/pypi/v/riboplot.svg | |
| 9 :target: https://pypi.python.org/pypi/riboplot | |
| 10 | |
| 11 | |
| 12 RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format). | |
| 13 | |
| 14 There are two programs in the package: | |
| 15 | |
| 16 **riboplot** | |
| 17 Plot and output read counts (csv) for a single transcript. | |
| 18 | |
| 19 **ribocount** | |
| 20 Output read counts for all transcripts in an alignment. | |
| 21 | |
| 22 For help on using these programs, please refer to :doc:`usage`. | |
| 23 | |
| 24 | |
| 25 Free software: BSD license. | |
| 26 | |
| 27 Documentation: https://riboplot.readthedocs.org. | |
| 28 |