Mercurial > repos > vimalkumarvelayudhan > riboplot
view run_riboplot_sample.sh @ 11:7571f5c89090
Simple error message now output to HTML. Detailed error goes to standard error.
Other changes:
* Remove information on time taken (riboplot).
* Remove striped table styles (not used. unusable on sorting).
* log before re-raising errors.
| author | Vimalkumar Velayudhan <vimal@biotechcoder.com> |
|---|---|
| date | Wed, 19 Aug 2015 10:14:52 +0100 |
| parents | 8e1efafa6277 |
| children |
line wrap: on
line source
#!/bin/bash python riboplot/riboplot.py -b tests/data/5hRPFsorted.bam \ -f tests/data/zebrafish.fna \ -t 'gi|148357119|ref|NM_001098396.1|' \ # -n tests/data/5hmRNAsorted.bam
