Mercurial > repos > vimalkumarvelayudhan > riboseqr_wrapper

comparison ribosome_profile.xml @ 6:5a242f289347 default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Merge
author Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com>
date Tue, 27 Oct 2015 12:29:39 +0000
parents d7ce95ccf54f
children
comparison
equal deleted inserted replaced
5:423ad61697c4 6:5a242f289347
19 --transcript_cap "$transcript_cap" 19 --transcript_cap "$transcript_cap"
20 --html_file "$html_file" 20 --html_file "$html_file"
21 --output_path "$html_file.files_path" 21 --output_path "$html_file.files_path"
22 </command> 22 </command>
23 <inputs> 23 <inputs>
24 <param name="rdata_load" format="rda" type="data" 24 <param name="rdata_load" format="RData" type="data"
25 label="Select Metagene analysis (R data file)" 25 label="Select Metagene analysis (R data file)"
26 multiple="false"> 26 multiple="false">
27 <validator type="expression" 27 <validator type="expression"
28 message="Please check if the correct RDA file is selected">value.name == "Metagene analysis (R data file)"</validator> 28 message="Please check if the correct RDA file is selected">value.name == "Metagene analysis (R data file)"</validator>
29 </param> 29 </param>
57 <data format="html" name="html_file" 57 <data format="html" name="html_file"
58 label="Plot ribosome profile (HTML report)"/> 58 label="Plot ribosome profile (HTML report)"/>
59 </outputs> 59 </outputs>
60 <!--<tests>--> 60 <!--<tests>-->
61 <!--<test>--> 61 <!--<test>-->
62 <!--<param name="rdata_load" value="Metagene analysis (R data file)"/>--> 62 <!--<param name="rdata_load" value="Metagene analysis (R data file)" ftype="RData" />-->
63 <!--<param name="transcript_name" value="CUFF.37930.1"/>--> 63 <!--<param name="transcript_name" value="CUFF.37930.1"/>-->
64 <!--<param name="transcript_length" value="27"/>--> 64 <!--<param name="transcript_length" value="27"/>-->
65 <!--<param name="transcript_cap" value="200"/>--> 65 <!--<param name="transcript_cap" value="200"/>-->
66 <!--<output name="html_file" file="Plot_ribosome_profile_(HTML_report).html">--> 66 <!--<output name="html_file" file="Plot_ribosome_profile_(HTML_report).html">-->
67 <!--<extra_files type="file" name="Ribosome-profile-plot.pdf" value="Ribosome-profile-plot.pdf" ftype="pdf"/>--> 67 <!--<extra_files type="file" name="Ribosome-profile-plot.pdf" value="Ribosome-profile-plot.pdf" ftype="pdf"/>-->