Mercurial > repos > vimalkumarvelayudhan > riboseqr_wrapper
diff triplet.xml @ 2:b2eb07000039
Fix spacing in environment_variables in tool_dependencies (breaks env.sh)
Cleanup help sections.
| author | Vimalkumar Velayudhan <vimal@biotechcoder.com> |
|---|---|
| date | Tue, 21 Jul 2015 15:40:22 +0100 |
| parents | c34c364ce75d |
| children | d7ce95ccf54f |
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--- a/triplet.xml Tue Jul 21 14:58:34 2015 +0100 +++ b/triplet.xml Tue Jul 21 15:40:22 2015 +0100 @@ -108,10 +108,10 @@ #. Prepare riboSeqR input (R data file) from the previous step. #. FASTA format file of the reference transcriptome. -.. class:: infomark + .. class:: infomark -Please note that the FASTA header of the transcriptome sequences must -match the sequence names from the SAM file. + Please note that the FASTA header of the transcriptome sequences must + match the sequence names from the SAM file. How to use? ----------- @@ -128,12 +128,12 @@ #. Triplet periodicity (HTML report) -A HTML file with results and links to other output files - triplet -periodicity plot (PDF) and R script used for the session. + A HTML file with results and links to other output files - triplet + periodicity plot (PDF) and R script used for the session. #. Triplet periodicity (R data file) -Used as input for the next step - *Metagene analysis*. + Used as input for the next step - *Metagene analysis*. riboSeqR functions used .......................