annotate test-data/s_cerevisiae_SCU49845.gbk @ 7:ee541c1852da

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author vipints
date Thu, 23 Apr 2015 17:43:11 -0400
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5
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1 LOCUS SCU49845 5028 bp DNA PLN 21-JUN-1999
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2 DEFINITION Saccharomyces cerevisiae TCP1-beta gene, partial cds, and Axl2p
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3 (AXL2) and Rev7p (REV7) genes, complete cds.
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4 ACCESSION U49845
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5 VERSION U49845.1 GI:1293613
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6 KEYWORDS .
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7 SOURCE Saccharomyces cerevisiae (baker's yeast)
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8 ORGANISM Saccharomyces cerevisiae
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9 Eukaryota; Fungi; Ascomycota; Saccharomycotina; Saccharomycetes;
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10 Saccharomycetales; Saccharomycetaceae; Saccharomyces.
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11 REFERENCE 1 (bases 1 to 5028)
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12 AUTHORS Torpey,L.E., Gibbs,P.E., Nelson,J. and Lawrence,C.W.
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13 TITLE Cloning and sequence of REV7, a gene whose function is required for
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14 DNA damage-induced mutagenesis in Saccharomyces cerevisiae
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15 JOURNAL Yeast 10 (11), 1503-1509 (1994)
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16 PUBMED 7871890
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17 REFERENCE 2 (bases 1 to 5028)
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18 AUTHORS Roemer,T., Madden,K., Chang,J. and Snyder,M.
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19 TITLE Selection of axial growth sites in yeast requires Axl2p, a novel
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20 plasma membrane glycoprotein
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21 JOURNAL Genes Dev. 10 (7), 777-793 (1996)
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22 PUBMED 8846915
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23 REFERENCE 3 (bases 1 to 5028)
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24 AUTHORS Roemer,T.
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25 TITLE Direct Submission
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26 JOURNAL Submitted (22-FEB-1996) Terry Roemer, Biology, Yale University, New
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27 Haven, CT, USA
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28 FEATURES Location/Qualifiers
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29 source 1..5028
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30 /organism="Saccharomyces cerevisiae"
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31 /db_xref="taxon:4932"
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32 /chromosome="IX"
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33 /map="9"
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34 CDS <1..206
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35 /codon_start=3
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36 /product="TCP1-beta"
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37 /protein_id="AAA98665.1"
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38 /db_xref="GI:1293614"
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39 /translation="SSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEA
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40 AEVLLRVDNIIRARPRTANRQHM"
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41 gene 687..3158
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42 /gene="AXL2"
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43 CDS 687..3158
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44 /gene="AXL2"
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45 /note="plasma membrane glycoprotein"
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46 /codon_start=1
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47 /function="required for axial budding pattern of S.
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48 cerevisiae"
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49 /product="Axl2p"
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50 /protein_id="AAA98666.1"
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51 /db_xref="GI:1293615"
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52 /translation="MTQLQISLLLTATISLLHLVVATPYEAYPIGKQYPPVARVNESF
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53 TFQISNDTYKSSVDKTAQITYNCFDLPSWLSFDSSSRTFSGEPSSDLLSDANTTLYFN
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54 VILEGTDSADSTSLNNTYQFVVTNRPSISLSSDFNLLALLKNYGYTNGKNALKLDPNE
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55 VFNVTFDRSMFTNEESIVSYYGRSQLYNAPLPNWLFFDSGELKFTGTAPVINSAIAPE
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56 TSYSFVIIATDIEGFSAVEVEFELVIGAHQLTTSIQNSLIINVTDTGNVSYDLPLNYV
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57 YLDDDPISSDKLGSINLLDAPDWVALDNATISGSVPDELLGKNSNPANFSVSIYDTYG
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58 DVIYFNFEVVSTTDLFAISSLPNINATRGEWFSYYFLPSQFTDYVNTNVSLEFTNSSQ
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59 DHDWVKFQSSNLTLAGEVPKNFDKLSLGLKANQGSQSQELYFNIIGMDSKITHSNHSA
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60 NATSTRSSHHSTSTSSYTSSTYTAKISSTSAAATSSAPAALPAANKTSSHNKKAVAIA
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61 CGVAIPLGVILVALICFLIFWRRRRENPDDENLPHAISGPDLNNPANKPNQENATPLN
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62 NPFDDDASSYDDTSIARRLAALNTLKLDNHSATESDISSVDEKRDSLSGMNTYNDQFQ
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63 SQSKEELLAKPPVQPPESPFFDPQNRSSSVYMDSEPAVNKSWRYTGNLSPVSDIVRDS
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64 YGSQKTVDTEKLFDLEAPEKEKRTSRDVTMSSLDPWNSNISPSPVRKSVTPSPYNVTK
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65 HRNRHLQNIQDSQSGKNGITPTTMSTSSSDDFVPVKDGENFCWVHSMEPDRRPSKKRL
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66 VDFSNKSNVNVGQVKDIHGRIPEML"
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67 gene complement(3300..4037)
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68 /gene="REV7"
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69 CDS complement(3300..4037)
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70 /gene="REV7"
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71 /codon_start=1
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72 /product="Rev7p"
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73 /protein_id="AAA98667.1"
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74 /db_xref="GI:1293616"
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75 /translation="MNRWVEKWLRVYLKCYINLILFYRNVYPPQSFDYTTYQSFNLPQ
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76 FVPINRHPALIDYIEELILDVLSKLTHVYRFSICIINKKNDLCIEKYVLDFSELQHVD
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77 KDDQIITETEVFDEFRSSLNSLIMHLEKLPKVNDDTITFEAVINAIELELGHKLDRNR
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78 RVDSLEEKAEIERDSNWVKCQEDENLPDNNGFQPPKIKLTSLVGSDVGPLIIHQFSEK
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79 LISGDDKILNGVYSQYEEGESIFGSLF"
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80 ORIGIN
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81 1 gatcctccat atacaacggt atctccacct caggtttaga tctcaacaac ggaaccattg
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82 61 ccgacatgag acagttaggt atcgtcgaga gttacaagct aaaacgagca gtagtcagct
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83 121 ctgcatctga agccgctgaa gttctactaa gggtggataa catcatccgt gcaagaccaa
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84 181 gaaccgccaa tagacaacat atgtaacata tttaggatat acctcgaaaa taataaaccg
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85 241 ccacactgtc attattataa ttagaaacag aacgcaaaaa ttatccacta tataattcaa
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86 301 agacgcgaaa aaaaaagaac aacgcgtcat agaacttttg gcaattcgcg tcacaaataa
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87 361 attttggcaa cttatgtttc ctcttcgagc agtactcgag ccctgtctca agaatgtaat
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88 421 aatacccatc gtaggtatgg ttaaagatag catctccaca acctcaaagc tccttgccga
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89 481 gagtcgccct cctttgtcga gtaattttca cttttcatat gagaacttat tttcttattc
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90 541 tttactctca catcctgtag tgattgacac tgcaacagcc accatcacta gaagaacaga
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91 601 acaattactt aatagaaaaa ttatatcttc ctcgaaacga tttcctgctt ccaacatcta
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92 661 cgtatatcaa gaagcattca cttaccatga cacagcttca gatttcatta ttgctgacag
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93 721 ctactatatc actactccat ctagtagtgg ccacgcccta tgaggcatat cctatcggaa
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94 781 aacaataccc cccagtggca agagtcaatg aatcgtttac atttcaaatt tccaatgata
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95 841 cctataaatc gtctgtagac aagacagctc aaataacata caattgcttc gacttaccga
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96 901 gctggctttc gtttgactct agttctagaa cgttctcagg tgaaccttct tctgacttac
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97 961 tatctgatgc gaacaccacg ttgtatttca atgtaatact cgagggtacg gactctgccg
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98 1021 acagcacgtc tttgaacaat acataccaat ttgttgttac aaaccgtcca tccatctcgc
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99 1081 tatcgtcaga tttcaatcta ttggcgttgt taaaaaacta tggttatact aacggcaaaa
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100 1141 acgctctgaa actagatcct aatgaagtct tcaacgtgac ttttgaccgt tcaatgttca
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101 1201 ctaacgaaga atccattgtg tcgtattacg gacgttctca gttgtataat gcgccgttac
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102 1261 ccaattggct gttcttcgat tctggcgagt tgaagtttac tgggacggca ccggtgataa
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103 1321 actcggcgat tgctccagaa acaagctaca gttttgtcat catcgctaca gacattgaag
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104 1381 gattttctgc cgttgaggta gaattcgaat tagtcatcgg ggctcaccag ttaactacct
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105 1441 ctattcaaaa tagtttgata atcaacgtta ctgacacagg taacgtttca tatgacttac
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106 1501 ctctaaacta tgtttatctc gatgacgatc ctatttcttc tgataaattg ggttctataa
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107 1561 acttattgga tgctccagac tgggtggcat tagataatgc taccatttcc gggtctgtcc
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108 1621 cagatgaatt actcggtaag aactccaatc ctgccaattt ttctgtgtcc atttatgata
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109 1681 cttatggtga tgtgatttat ttcaacttcg aagttgtctc cacaacggat ttgtttgcca
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110 1741 ttagttctct tcccaatatt aacgctacaa ggggtgaatg gttctcctac tattttttgc
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111 1801 cttctcagtt tacagactac gtgaatacaa acgtttcatt agagtttact aattcaagcc
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112 1861 aagaccatga ctgggtgaaa ttccaatcat ctaatttaac attagctgga gaagtgccca
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113 1921 agaatttcga caagctttca ttaggtttga aagcgaacca aggttcacaa tctcaagagc
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114 1981 tatattttaa catcattggc atggattcaa agataactca ctcaaaccac agtgcgaatg
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115 2041 caacgtccac aagaagttct caccactcca cctcaacaag ttcttacaca tcttctactt
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116 2101 acactgcaaa aatttcttct acctccgctg ctgctacttc ttctgctcca gcagcgctgc
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117 2161 cagcagccaa taaaacttca tctcacaata aaaaagcagt agcaattgcg tgcggtgttg
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118 2221 ctatcccatt aggcgttatc ctagtagctc tcatttgctt cctaatattc tggagacgca
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119 2281 gaagggaaaa tccagacgat gaaaacttac cgcatgctat tagtggacct gatttgaata
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120 2341 atcctgcaaa taaaccaaat caagaaaacg ctacaccttt gaacaacccc tttgatgatg
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121 2401 atgcttcctc gtacgatgat acttcaatag caagaagatt ggctgctttg aacactttga
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122 2461 aattggataa ccactctgcc actgaatctg atatttccag cgtggatgaa aagagagatt
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123 2521 ctctatcagg tatgaataca tacaatgatc agttccaatc ccaaagtaaa gaagaattat
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124 2581 tagcaaaacc cccagtacag cctccagaga gcccgttctt tgacccacag aataggtctt
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125 2641 cttctgtgta tatggatagt gaaccagcag taaataaatc ctggcgatat actggcaacc
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126 2701 tgtcaccagt ctctgatatt gtcagagaca gttacggatc acaaaaaact gttgatacag
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127 2761 aaaaactttt cgatttagaa gcaccagaga aggaaaaacg tacgtcaagg gatgtcacta
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128 2821 tgtcttcact ggacccttgg aacagcaata ttagcccttc tcccgtaaga aaatcagtaa
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129 2881 caccatcacc atataacgta acgaagcatc gtaaccgcca cttacaaaat attcaagact
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130 2941 ctcaaagcgg taaaaacgga atcactccca caacaatgtc aacttcatct tctgacgatt
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131 3001 ttgttccggt taaagatggt gaaaattttt gctgggtcca tagcatggaa ccagacagaa
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132 3061 gaccaagtaa gaaaaggtta gtagattttt caaataagag taatgtcaat gttggtcaag
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133 3121 ttaaggacat tcacggacgc atcccagaaa tgctgtgatt atacgcaacg atattttgct
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134 3181 taattttatt ttcctgtttt attttttatt agtggtttac agatacccta tattttattt
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135 3241 agtttttata cttagagaca tttaatttta attccattct tcaaatttca tttttgcact
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136 3301 taaaacaaag atccaaaaat gctctcgccc tcttcatatt gagaatacac tccattcaaa
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137 3361 attttgtcgt caccgctgat taatttttca ctaaactgat gaataatcaa aggccccacg
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138 3421 tcagaaccga ctaaagaagt gagttttatt ttaggaggtt gaaaaccatt attgtctggt
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139 3481 aaattttcat cttcttgaca tttaacccag tttgaatccc tttcaatttc tgctttttcc
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140 3541 tccaaactat cgaccctcct gtttctgtcc aacttatgtc ctagttccaa ttcgatcgca
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141 3601 ttaataactg cttcaaatgt tattgtgtca tcgttgactt taggtaattt ctccaaatgc
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142 3661 ataatcaaac tatttaagga agatcggaat tcgtcgaaca cttcagtttc cgtaatgatc
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143 3721 tgatcgtctt tatccacatg ttgtaattca ctaaaatcta aaacgtattt ttcaatgcat
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144 3781 aaatcgttct ttttattaat aatgcagatg gaaaatctgt aaacgtgcgt taatttagaa
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145 3841 agaacatcca gtataagttc ttctatatag tcaattaaag caggatgcct attaatggga
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146 3901 acgaactgcg gcaagttgaa tgactggtaa gtagtgtagt cgaatgactg aggtgggtat
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147 3961 acatttctat aaaataaaat caaattaatg tagcatttta agtataccct cagccacttc
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148 4021 tctacccatc tattcataaa gctgacgcaa cgattactat tttttttttc ttcttggatc
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149 4081 tcagtcgtcg caaaaacgta taccttcttt ttccgacctt ttttttagct ttctggaaaa
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150 4141 gtttatatta gttaaacagg gtctagtctt agtgtgaaag ctagtggttt cgattgactg
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151 4201 atattaagaa agtggaaatt aaattagtag tgtagacgta tatgcatatg tatttctcgc
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152 4261 ctgtttatgt ttctacgtac ttttgattta tagcaagggg aaaagaaata catactattt
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153 4321 tttggtaaag gtgaaagcat aatgtaaaag ctagaataaa atggacgaaa taaagagagg
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154 4381 cttagttcat cttttttcca aaaagcaccc aatgataata actaaaatga aaaggatttg
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155 4441 ccatctgtca gcaacatcag ttgtgtgagc aataataaaa tcatcacctc cgttgccttt
6e589f267c14 Uploaded
devteam
parents:
diff changeset
156 4501 agcgcgtttg tcgtttgtat cttccgtaat tttagtctta tcaatgggaa tcataaattt
6e589f267c14 Uploaded
devteam
parents:
diff changeset
157 4561 tccaatgaat tagcaatttc gtccaattct ttttgagctt cttcatattt gctttggaat
6e589f267c14 Uploaded
devteam
parents:
diff changeset
158 4621 tcttcgcact tcttttccca ttcatctctt tcttcttcca aagcaacgat ccttctaccc
6e589f267c14 Uploaded
devteam
parents:
diff changeset
159 4681 atttgctcag agttcaaatc ggcctctttc agtttatcca ttgcttcctt cagtttggct
6e589f267c14 Uploaded
devteam
parents:
diff changeset
160 4741 tcactgtctt ctagctgttg ttctagatcc tggtttttct tggtgtagtt ctcattatta
6e589f267c14 Uploaded
devteam
parents:
diff changeset
161 4801 gatctcaagt tattggagtc ttcagccaat tgctttgtat cagacaattg actctctaac
6e589f267c14 Uploaded
devteam
parents:
diff changeset
162 4861 ttctccactt cactgtcgag ttgctcgttt ttagcggaca aagatttaat ctcgttttct
6e589f267c14 Uploaded
devteam
parents:
diff changeset
163 4921 ttttcagtgt tagattgctc taattctttg agctgttctc tcagctcctc atatttttct
6e589f267c14 Uploaded
devteam
parents:
diff changeset
164 4981 tgccatgact cagattctaa ttttaagcta ttcaatttct ctttgatc
6e589f267c14 Uploaded
devteam
parents:
diff changeset
165 //