Mercurial > repos > vipints > fml_gff3togtf

comparison GFFtools-GX/test-data/hs_2009.bed @ 3:ff2c2e6f4ab3

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Uploaded version 2.0.0 of gfftools ready to import to local instance
author vipints
date Wed, 11 Jun 2014 16:29:25 -0400
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comparison
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2:db3c67b03d55 3:ff2c2e6f4ab3
1 chr1 11873 14409 uc001aaa.3 0 + 11873 11873 0 3 354,109,1189, 0,739,1347,
2 chr1 11873 14409 uc010nxq.1 0 + 12189 13639 0 3 354,127,1007, 0,721,1529,
3 chr1 11873 14409 uc010nxr.1 0 + 11873 11873 0 3 354,52,1189, 0,772,1347,
4 chr1 14362 16765 uc009vis.2 0 - 14362 14362 0 4 467,69,147,159, 0,607,1433,2244,
5 chr1 16857 17751 uc009vjc.1 0 - 16857 16857 0 2 198,519, 0,375,
6 chr1 15795 18061 uc009vjd.2 0 - 15795 15795 0 5 152,159,198,136,456, 0,811,1062,1437,1810,
7 chr1 14362 19759 uc009vit.2 0 - 14362 14362 0 9 467,69,152,159,198,510,147,99,847, 0,607,1433,2244,2495,2870,3552,3905,4550,
8 chr1 14362 19759 uc001aae.3 0 - 14362 14362 0 10 467,69,152,159,198,136,137,147,99,847, 0,607,1433,2244,2495,2870,3243,3552,3905,4550,
9 chr1 14362 19759 uc009viu.2 0 - 14362 14362 0 10 467,69,152,159,198,510,147,102,54,847, 0,607,1433,2244,2495,2870,3552,3905,4138,4550,
10 chr1 16857 19759 uc001aai.1 0 - 16857 16857 0 6 198,136,137,147,112,847, 0,375,748,1057,1410,2055,
11 chr1 14362 24901 uc001aab.3 0 - 14362 14362 0 10 467,69,152,159,202,136,137,147,112,164, 0,607,1433,2244,2491,2870,3243,3552,3905,10375,
12 chr1 14362 29370 uc001aah.3 0 - 14362 14362 0 11 467,69,152,159,198,136,137,147,99,154,50, 0,607,1433,2244,2495,2870,3243,3552,3905,10375,14958,
13 chr1 14362 29370 uc009vir.2 0 - 14362 14362 0 10 467,69,152,159,198,510,147,99,154,50, 0,607,1433,2244,2495,2870,3552,3905,10375,14958,
14 chr1 14362 29370 uc009viq.2 0 - 14362 14362 0 7 467,152,159,198,456,154,50, 0,1433,2244,2495,3243,10375,14958,
15 chr1 14362 29370 uc001aac.3 0 - 14362 14362 0 11 467,69,152,159,198,110,137,147,102,154,50, 0,607,1433,2244,2495,2896,3243,3552,3905,10375,14958,
16 chr1 14406 29370 uc009viv.2 0 - 14406 14406 0 7 2359,198,136,137,147,154,50, 0,2451,2826,3199,3508,10331,14914,
17 chr1 14406 29370 uc009viw.2 0 - 14406 14406 0 7 2359,198,510,147,99,154,50, 0,2451,2826,3508,3861,10331,14914,
18 chr1 15602 29370 uc009vix.2 0 - 15602 15602 0 7 345,159,198,136,147,154,50, 0,1004,1255,1630,2312,9135,13718,
19 chr1 16606 29370 uc009viz.2 0 - 16606 16606 0 8 159,202,136,137,147,112,154,50, 0,247,626,999,1308,1661,8131,12714,
20 chr1 16606 29370 uc009viy.2 0 - 16606 16606 0 9 159,198,136,137,147,95,58,154,50, 0,251,626,999,1308,1661,1890,8131,12714,
21 chr1 16857 29370 uc010nxs.1 0 - 16857 16857 0 8 198,136,137,147,99,227,154,50, 0,375,748,1057,1410,2055,7880,12463,
22 chr1 17232 29370 uc009vje.2 0 - 17232 17232 0 4 510,147,99,50, 0,682,1035,12088,
23 chr1 17605 29370 uc009vjf.2 0 - 17605 17605 0 7 137,147,95,58,227,154,50, 0,309,662,891,1307,7132,11715,
24 chr1 16857 29961 uc009vjb.1 0 - 16857 16857 0 7 198,136,137,147,112,154,138, 0,375,748,1057,1410,7880,12966,
25 chr1 34611 36081 uc001aak.2 0 - 34611 34611 0 3 563,205,361, 0,665,1109,
26 chr1 69090 70008 uc001aal.1 0 + 69090 70008 0 1 918, 0,
27 chr1 137838 139228 uc001aam.3 0 - 137838 137838 0 1 1390, 0,
28 chr1 89294 237877 uc010nxt.1 0 - 89294 89294 0 2 1110,1263, 0,147320,
29 chr1 321083 321114 uc001aaq.1 0 + 321083 321083 0 1 31, 0,
30 chr1 321145 321223 uc001aar.1 0 + 321145 321145 0 1 78, 0,
31 chr1 322036 326938 uc009vjk.2 0 + 324342 325605 0 3 192,58,2500, 0,2251,2402,
32 chr1 323891 328580 uc001aav.3 0 + 323891 323891 0 4 169,58,2500,1545, 0,396,547,3144,
33 chr1 323891 328580 uc001aau.2 0 + 324342 325605 0 3 169,58,4142, 0,396,547,
34 chr1 367658 368595 uc010nxu.1 0 + 367658 368594 0 1 937, 0,
35 chr1 420205 421839 uc001aax.1 0 + 420205 420205 0 3 91,267,444, 0,786,1190,
36 chr1 566461 568045 uc001aaz.2 0 + 566461 566461 0 1 1584, 0,
37 chr1 568148 568842 uc001aba.1 0 + 568148 568148 0 1 694, 0,
38 chr1 568843 568912 uc001abb.2 0 + 568843 568843 0 1 69, 0,
39 chr1 569326 570349 uc001abc.2 0 + 569326 569326 0 1 1023, 0,
40 chr1 621097 622034 uc010nxv.1 0 - 621098 622034 0 1 937, 0,
41 chr1 661139 665731 uc001abe.3 0 - 664484 665108 0 3 4045,58,169, 0,4138,4423,
42 chr1 668401 668479 uc001abi.1 0 - 668401 668401 0 1 78, 0,
43 chr1 668510 668541 uc001abj.2 0 - 668510 668510 0 1 31, 0,
44 chr1 661139 670994 uc009vjm.2 0 - 664484 665108 0 3 4045,58,192, 0,7547,9663,
45 chr1 671807 671885 uc010nxw.1 0 - 671807 671807 0 1 78, 0,
46 chr1 671916 671947 uc001abl.2 0 - 671916 671916 0 1 31, 0,
47 chr1 661139 679736 uc002khh.2 0 - 661139 661139 0 7 4045,58,191,233,58,65,162, 0,4138,6257,14043,14369,17526,18435,
48 chr1 674239 679736 uc001abm.2 0 - 674239 674239 0 5 165,233,58,65,162, 0,943,1269,4426,5335,
49 chr1 700236 714006 uc001abo.2 0 - 700236 700236 0 7 391,59,66,216,132,110,343, 0,1472,3691,4640,8119,9314,13427,
50 chr1 761586 762902 uc010nxx.1 0 - 762079 762571 0 1 1316, 0,
51 chr1 763063 788902 uc009vjn.1 0 + 763063 763063 0 4 92,102,184,132, 0,1319,24243,25707,
52 chr1 763063 788997 uc001abp.1 0 + 763063 763063 0 6 92,102,153,184,96,227, 0,1319,19970,24243,24987,25707,
53 chr1 763063 788997 uc001abq.1 0 + 763063 763063 0 5 92,102,184,96,227, 0,1319,24243,24987,25707,
54 chr1 763063 788997 uc009vjo.1 0 + 763063 763063 0 4 92,102,96,227, 0,1319,24987,25707,
55 chr1 763063 789740 uc001abr.1 0 + 763063 763063 0 7 92,102,153,184,96,132,784, 0,1319,19970,24243,24987,25707,25893,
56 chr1 791897 794579 uc001abs.2 0 + 791897 791897 0 1 2682, 0,
57 chr1 803452 812182 uc001abt.3 0 - 803452 803452 0 3 603,1044,57, 0,6039,8673,
58 chr1 846814 850328 uc001abu.1 0 + 846814 846814 0 2 39,3004, 0,510,