annotate rDiff/src/locfit/m/lfgui.m @ 2:233c30f91d66

updated python based GFF parsing module which will handle GTF/GFF/GFF3 file types
author vipints <vipin@cbio.mskcc.org>
date Tue, 08 Oct 2013 07:15:44 -0400
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1 function varargout = lfgui(varargin)
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2 % LFGUI M-file for lfgui.fig
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3 % LFGUI, by itself, creates a new LFGUI or raises the existing
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4 % singleton*.
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5 %
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6 % H = LFGUI returns the handle to a new LFGUI or the handle to
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7 % the existing singleton*.
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8 %
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9 % LFGUI('CALLBACK',hObject,eventData,handles,...) calls the local
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10 % function named CALLBACK in LFGUI.M with the given input arguments.
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11 %
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12 % LFGUI('Property','Value',...) creates a new LFGUI or raises the
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13 % existing singleton*. Starting from the left, property value pairs are
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14 % applied to the GUI before lfgui_OpeningFunction gets called. An
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15 % unrecognized property name or invalid value makes property application
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16 % stop. All inputs are passed to lfgui_OpeningFcn via varargin.
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17 %
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18 % *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one
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19 % instance to run (singleton)".
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20 %
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21 % See also: GUIDE, GUIDATA, GUIHANDLES
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22
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23 % Copyright 2002-2003 The MathWorks, Inc.
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24
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25 % Edit the above text to modify the response to help lfgui
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26
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27 % Last Modified by GUIDE v2.5 27-Dec-2005 18:56:48
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28
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29 % Begin initialization code - DO NOT EDIT
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30 gui_Singleton = 1;
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31 gui_State = struct('gui_Name', mfilename, ...
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32 'gui_Singleton', gui_Singleton, ...
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33 'gui_OpeningFcn', @lfgui_OpeningFcn, ...
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34 'gui_OutputFcn', @lfgui_OutputFcn, ...
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35 'gui_LayoutFcn', [] , ...
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36 'gui_Callback', []);
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37 if nargin && ischar(varargin{1})
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38 gui_State.gui_Callback = str2func(varargin{1});
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39 end
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40
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41 if nargout
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42 [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
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43 else
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44 gui_mainfcn(gui_State, varargin{:});
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45 end
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46 % End initialization code - DO NOT EDIT
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47
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48
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49 % --- Executes just before lfgui is made visible.
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50 function lfgui_OpeningFcn(hObject, eventdata, handles, varargin)
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51 % This function has no output args, see OutputFcn.
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52 % hObject handle to figure
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53 % eventdata reserved - to be defined in a future version of MATLAB
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54 % handles structure with handles and user data (see GUIDATA)
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55 % varargin command line arguments to lfgui (see VARARGIN)
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56
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57 fit = locfit(varargin{:});
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58 lfplot(fit);
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59 handles.lfargs = varargin;
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60
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61 % Choose default command line output for lfgui
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62 handles.output = hObject;
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63
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64 % Update handles structure
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65 guidata(hObject, handles);
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66
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67 % UIWAIT makes lfgui wait for user response (see UIRESUME)
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68 % uiwait(handles.figure1);
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69
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70
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71 % --- Outputs from this function are returned to the command line.
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72 function varargout = lfgui_OutputFcn(hObject, eventdata, handles)
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73 % varargout cell array for returning output args (see VARARGOUT);
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74 % hObject handle to figure
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75 % eventdata reserved - to be defined in a future version of MATLAB
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76 % handles structure with handles and user data (see GUIDATA)
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77
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78 % Get default command line output from handles structure
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79 varargout{1} = handles.output;
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80
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81
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82 % --- Executes on slider movement.
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83 function slider1_Callback(hObject, eventdata, handles)
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84 % hObject handle to slider1 (see GCBO)
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85 % eventdata reserved - to be defined in a future version of MATLAB
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86 % handles structure with handles and user data (see GUIDATA)
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87
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88 % Hints: get(hObject,'Value') returns position of slider
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89 % get(hObject,'Min') and get(hObject,'Max') to determine range of slider
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90
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91 n = get(hObject,'Value');
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92 n0 = get(hObject,'Min');
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93 n1 = get(hObject,'Max');
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94 nn = 0.1+(n-n0)/(n1-n0);
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95 fit = locfit(handles.lfargs{:},'nn',nn);
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96 lfplot(fit);
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97
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98 % --- Executes during object creation, after setting all properties.
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99 function slider1_CreateFcn(hObject, eventdata, handles)
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100 % hObject handle to slider1 (see GCBO)
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101 % eventdata reserved - to be defined in a future version of MATLAB
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102 % handles empty - handles not created until after all CreateFcns called
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103
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104 % Hint: slider controls usually have a light gray background, change
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105 % 'usewhitebg' to 0 to use default. See ISPC and COMPUTER.
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106 usewhitebg = 1;
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107 if usewhitebg
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108 set(hObject,'BackgroundColor',[.9 .9 .9]);
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109 else
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110 set(hObject,'BackgroundColor',get(0,'defaultUicontrolBackgroundColor'));
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111 end
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112
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113