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annotate rDiff/tools/determine_engine.m @ 2:233c30f91d66

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updated python based GFF parsing module which will handle GTF/GFF/GFF3 file types
author vipints <vipin@cbio.mskcc.org>
date Tue, 08 Oct 2013 07:15:44 -0400
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children
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1 function [engine, environment, basedir, mccdir, license_type] = determine_engine()
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2 % DETERMINES_ENGINE Determines used interpreter.
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3 %
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4 % [engine, environment, basedir, mccdir, license_type] = determine_engine() ;
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5 %
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6 % returns either 'matlab' or 'octave' in variable engine
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7 % and 'internal' or 'galaxy' in variable environment
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8 % basedir is the directory of the matlab or octave instance
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9 % mccdir is the directory of the matlab compiler (does not yet exist for octave)
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10 %
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11 %
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12 % This program is free software; you can redistribute it and/or modify
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13 % it under the terms of the GNU General Public License as published by
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14 % the Free Software Foundation; either version 3 of the License, or
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15 % (at your option) any later version.
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16 %
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17 % Written (W) 2009-2010 Gunnar Raetsch
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18 % Copyright (C) 2009-2010 Max Planck Society
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19 %
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20
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21
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22 global g_license_type ;
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23
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24 if isempty(g_license_type),
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25 g_license_type = 'academic' ;
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26 end ;
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27 license_type = g_license_type ;
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28
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29 lic=license ;
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30 if ~isequal(lic, 'GNU General Public License'),
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31 engine='matlab' ;
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32 else
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33 engine='octave' ;
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34 end ;
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35
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36 environment='internal' ;
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37 if isequal(whoami, 'galaxy'),
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38 environment='galaxy' ;
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39 end ;
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40
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41 if isequal(engine, 'matlab') && isequal(environment, 'internal'),
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42 basedir = '' ;
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43 elseif isequal(engine, 'matlab') && isequal(environment, 'galaxy'),
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44 basedir = '' ;
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45 elseif isequal(engine, 'octave') && isequal(environment, 'internal'),
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46 basedir = '' ;
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47 elseif isequal(engine, 'octave') && isequal(environment, 'galaxy'),
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48 basedir = '' ;
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49 end ;
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50
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51 if isequal(environment, 'internal'),
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52 mccdir = '' ;
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53 elseif isequal(environment, 'galaxy'),
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54 mccdir = '' ;
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55 end ;
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56
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57 return