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comparison covstats.xml @ 2:72d20758ba2c

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final upload
author wolma
date Wed, 11 Feb 2015 09:23:43 -0500
parents a548b3c6ed00
children bdd1995c9e66
comparison
equal deleted inserted replaced
1:a548b3c6ed00 2:72d20758ba2c
1 <tool id="coverage_stats" name="Coverage Statistics"> 1 <tool id="coverage_stats" name="Coverage Statistics">
2 <description>Calculate coverage statistics for a BCF file as generated by the Variant Calling tool</description> 2 <description>Calculate coverage statistics for a BCF file as generated by the Variant Calling tool</description>
3 <requirements> 3 <macros>
4 <requirement type="package">mimodd</requirement> 4 <import>toolshed_macros.xml</import>
5 </requirements> 5 </macros>
6 <expand macro="requirements"/>
6 <version_command>mimodd version -q</version_command> 7 <version_command>mimodd version -q</version_command>
7 <command> 8 <command>
8 mimodd covstats "$ifile" --ofile "$output_vcf" 9 mimodd covstats "$ifile" --ofile "$output_vcf"
9 </command> 10 </command>
10 11