Mercurial > repos > wolma > mimodd
comparison vcf_filter.xml @ 2:72d20758ba2c
final upload
author | wolma |
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date | Wed, 11 Feb 2015 09:23:43 -0500 |
parents | a548b3c6ed00 |
children | ffee8534a5c4 |
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1:a548b3c6ed00 | 2:72d20758ba2c |
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1 <tool id="vcf_filter" name="VCF Filter"> | 1 <tool id="vcf_filter" name="VCF Filter"> |
2 <description>Extracts lines from a vcf variant file based on field-specific filters</description> | 2 <description>Extracts lines from a vcf variant file based on field-specific filters</description> |
3 <requirements> | 3 <macros> |
4 <requirement type="package">mimodd</requirement> | 4 <import>toolshed_macros.xml</import> |
5 </requirements> | 5 </macros> |
6 <expand macro="requirements"/> | |
6 <version_command>mimodd version -q</version_command> | 7 <version_command>mimodd version -q</version_command> |
7 <command> | 8 <command> |
8 mimodd vcf-filter | 9 mimodd vcf-filter |
9 "$inputfile" | 10 "$inputfile" |
10 -o "$outputfile" | 11 -o "$outputfile" |