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comparison deletion_predictor.xml @ 1:a548b3c6ed00

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corrected upload
author wolma
date Wed, 11 Feb 2015 08:57:11 -0500
parents 6231ae8f87b8
children 72d20758ba2c
comparison
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0:6231ae8f87b8 1:a548b3c6ed00
1 <tool id="deletion_prediction" name="Deletion Prediction for paired-end data"> 1 <tool id="deletion_prediction" name="Deletion Prediction for paired-end data">
2 <description>Predicts deletions in one or more aligned read samples based on coverage of the reference genome and on insert sizes</description> 2 <description>Predicts deletions in one or more aligned read samples based on coverage of the reference genome and on insert sizes</description>
3 <requirements>
4 <requirement type="package">mimodd</requirement>
5 </requirements>
3 <version_command>mimodd version -q</version_command> 6 <version_command>mimodd version -q</version_command>
4 <command> 7 <command>
5 mimodd delcall 8 mimodd delcall
6 #for $l in $list_input 9 #for $l in $list_input
7 "${l.bamfile}" 10 "${l.bamfile}"