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comparison sam_header.xml @ 21:c46406466625 draft

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Uploaded
author wolma
date Sat, 11 Jun 2016 19:10:44 -0400
parents 93db2f9bca12
children 5db0545b9004
comparison
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20:aba6d9b1c1f1 21:c46406466625
2 <description>Create a SAM format header from run metadata for sample annotation.</description> 2 <description>Create a SAM format header from run metadata for sample annotation.</description>
3 <macros> 3 <macros>
4 <import>toolshed_macros.xml</import> 4 <import>toolshed_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <version_command>mimodd version -q</version_command> 7 <version_command>python3 -m MiModD version -q</version_command>
8 <command> 8 <command>
9 mimodd header 9 python3 -m MiModD header
10 10
11 --rg-id "$rg_id" 11 --rg-id "$rg_id"
12 --rg-sm "$rg_sm" 12 --rg-sm "$rg_sm"
13 13
14 #if $str($rg_cn): 14 #if $str($rg_cn):