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comparison varextract.xml @ 21:c46406466625 draft

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Uploaded
author wolma
date Sat, 11 Jun 2016 19:10:44 -0400
parents 93db2f9bca12
children 5db0545b9004
comparison
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20:aba6d9b1c1f1 21:c46406466625
2 <description>from a BCF file</description> 2 <description>from a BCF file</description>
3 <macros> 3 <macros>
4 <import>toolshed_macros.xml</import> 4 <import>toolshed_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <version_command>mimodd version -q</version_command> 7 <version_command>python3 -m MiModD version -q</version_command>
8 <command> 8 <command>
9 mimodd varextract "$ifile" 9 python3 -m MiModD varextract "$ifile"
10 #if $len($sitesinfo) 10 #if $len($sitesinfo)
11 -p 11 -p
12 #for $source in $sitesinfo 12 #for $source in $sitesinfo
13 "${source.pre_vcf}" 13 "${source.pre_vcf}"
14 #end for 14 #end for