Mercurial > repos > wolma > mimodd_extract_variants
comparison varextract.xml @ 3:c636b35c5e59 draft default tip
upgrade to v0.1.5.1
| author | wolma |
|---|---|
| date | Fri, 16 Jan 2015 10:56:13 -0500 |
| parents | 76cce6f89a9e |
| children |
comparison
equal
deleted
inserted
replaced
| 2:428fcbe430ac | 3:c636b35c5e59 |
|---|---|
| 13 #end for | 13 #end for |
| 14 #end if | 14 #end if |
| 15 --ofile $output_vcf | 15 --ofile $output_vcf |
| 16 $keep_alts | 16 $keep_alts |
| 17 --verbose | 17 --verbose |
| 18 --quiet | |
| 19 </command> | 18 </command> |
| 20 | 19 |
| 21 <inputs> | 20 <inputs> |
| 22 <param name="ifile" type="data" format="bcf" label="BCF input file" help="Use the Variant Calling tool to generate the input for this tool."/> | 21 <param name="ifile" type="data" format="bcf" label="BCF input file" help="Use the Variant Calling tool to generate the input for this tool."/> |
| 23 <repeat name="sitesinfo" title="include information from pre-calculated vcf file" default="0"> | 22 <repeat name="sitesinfo" title="include information from pre-calculated vcf file" default="0"> |