Mercurial > repos > workflow4metabolomics > influx_si
diff README.rst @ 0:9b03a930b08b draft
"planemo upload commit 8e69ff6919990050909511d8bdfb520c19a4af72"
author | workflow4metabolomics |
---|---|
date | Mon, 04 May 2020 03:24:12 -0400 |
parents | |
children | 57f199aa07e4 |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Mon May 04 03:24:12 2020 -0400 @@ -0,0 +1,20 @@ + +Metabolic flux estimation +------------------------- + +`influx_si` can be used for metabolic flux estimation based on labeling data from MS and/or NMR measurements. `influx_s` is used for stationary labeling and `influx_i` for instationary one (hence the '_s' and '_i' in the names). Tha name `influx_si` is used as common for both tools. + +The input for `influx_si` in one or several FTBL files, each describing a given labeling experiment and options to use during estimation. In addition, for `influx_i` a file with time course data has to be provided for each FTBL file. + +The output is a zip archive with files generated by `influx_si`. Among the most important is file ending with `_res.kvh` which contains the main information about estimated parameters, their statistics and so on. +If, in your FTBL file, you have requested ploting information, it can be found in respective .pdf file. + +For detailed documentation about `influx_si` and accompanying tools see https://metasys.insa-toulouse.fr/software/influx/doc/ + +For getting a standalone version of `influx_si` see https://metasys.insa-toulouse.fr/software/influx/ + +Author: Serguei Sokol + +License: GPL2 + +© INRAE 2020