Mercurial > repos > workflow4metabolomics > influx_si

diff test-data/e_coli_i.log @ 2:57f199aa07e4 draft default tip

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planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/blob/master/tools/influx_si/ commit 77b389c6f38fb8eb7d46366e7dd75b01229cc911
author workflow4metabolomics
date Wed, 13 Dec 2023 08:56:04 +0000
parents 4e3d4318113b
children
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--- a/test-data/e_coli_i.log	Wed Sep 13 19:52:44 2023 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,47 +0,0 @@
-"/usr/local/miniconda3/bin/influx_i" "e_coli_i.ftbl"
-code gen: 2020-03-25 15:40:11
-executing: "/usr/local/miniconda3/bin/python3.7" "/home/STORAGE/local/miniconda3/bin/ftbl2optR.py" "--tblimit" "0" "--ropts" "noscale=TRUE; clowp=1e-09; zc=0.0; time_order='2'; TIMEIT=TRUE" "--case_i" "e_coli_i.ftbl"
-executing: R --vanilla --slave < e_coli_i.R
-calcul  : 2020-03-25 15:40:14
-load    : 2020-03-25 15:40:18.59 cpu=1.02
-rinit   : 2020-03-25 15:40:18.61 cpu=1.031
-r_flux  : 2020-03-25 15:40:18.61 cpu=1.031
-Afl qr(): 2020-03-25 15:40:18.68 cpu=1.101
-dfl_dffg: 2020-03-25 15:40:18.91 cpu=1.139
-spAbr   : 2020-03-25 15:40:18.91 cpu=1.143
-weight 1: 2020-03-25 15:40:18.91 cpu=1.143
-weight 2: 2020-03-25 15:40:18.95 cpu=1.225
-weight 3: 2020-03-25 15:40:19.02 cpu=1.348
-weight 4: 2020-03-25 15:40:19.07 cpu=1.456
-weight 5: 2020-03-25 15:40:19.10 cpu=1.506
-weight 6: 2020-03-25 15:40:19.17 cpu=1.574
-measure : 2020-03-25 15:40:19.25 cpu=1.602
-ineq    : 2020-03-25 15:40:19.33 cpu=1.683
-preopt  : 2020-03-25 15:40:19.57 cpu=2.056
-labargs : 2020-03-25 15:40:19.58 cpu=2.069
-cl expor: 2020-03-25 15:40:20.32 cpu=2.089
-cl sourc: 2020-03-25 15:40:21.20 cpu=2.204
-run    1: 2020-03-25 15:40:24.75 cpu=5.386
-Starting point
-zc ineq : 2020-03-25 15:40:24.75 cpu=5.387
-kvh init: 2020-03-25 15:40:24.78 cpu=5.432
-check ja: 2020-03-25 15:40:25.27 cpu=5.625
-optim   : 2020-03-25 15:40:26.47 cpu=5.632
-it=0	res=237.7947
-it=1	res=70.06248	normstep=30.47659	btk=1
-it=2	res=36.43491	normstep=31.35182	btk=1
-it=3	res=21.83319	normstep=0.2793447	btk=1
-it=4	res=21.7384	normstep=0.03332941	btk=1
-it=5	res=21.72383	normstep=0.03867587	btk=1
-it=6	res=21.6348	normstep=0.08885869	btk=1
-it=7	res=21.37745	normstep=0.4890457	btk=0.5
-it=8	res=21.24931	normstep=0.6490092	btk=1
-it=9	res=20.96647	normstep=0.3171006	btk=1
-it=10	res=20.96366	normstep=0.1287473	btk=1
-it=15	res=20.96358	normstep=5.449035e-05	btk=1
-secondzc: 2020-03-25 15:40:41.08 cpu=8.101
-After the first optimization, no zero crossing inequality was activated. So no reoptimization
-postopt : 2020-03-25 15:40:41.09 cpu=8.111
-linstats: 2020-03-25 15:40:41.87 cpu=8.697
-rend    : 2020-03-25 15:40:42.16 cpu=9.089
-end     : 2020-03-25 15:40:43