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comparison isoplot.xml @ 1:dd3e046a72ad draft default tip

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"planemo upload for repository https://github.com/llegregam/Isoplot/tree/main commit 97521f53202a392709ba96988129ae08d0dac317"
author workflow4metabolomics
date Mon, 04 Oct 2021 09:01:32 +0000
parents 8b54f922377a
children
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0:8b54f922377a 1:dd3e046a72ad
1 <tool id='isoplot' name='Isoplot: Generate plots from isocor output' version='1.3.0+galaxy0' profile='20.01'> 1 <tool id='isoplot' name='Isoplot: Generate plots from isocor output' version='1.3.0+galaxy1' profile='20.01'>
2 <requirements> 2 <requirements>
3 <requirement type='package' version='1.3.0'>isoplot</requirement> 3 <requirement type='package' version='1.3.0'>isoplot</requirement>
4 </requirements> 4 </requirements>
5 <command><![CDATA[ 5 <command><![CDATA[
6 isoplot '$datafile' 'galaxy' '$format' --value '$value' --template '$template_file' $SP.barplot $SP.meaned_barplot 6 isoplot '$datafile' 'galaxy' '$format' --value '$value' --template '$template_file' $SP.barplot $SP.meaned_barplot
15 -a 15 -a
16 #end if 16 #end if
17 -g -z '$plots_output' > $data_output 2> '$log_output' 17 -g -z '$plots_output' > $data_output 2> '$log_output'
18 ]]></command> 18 ]]></command>
19 <inputs> 19 <inputs>
20 <param name='datafile' type='data' format='csv, tabular' multiple='true' label='Upload data that has been corrected by Isocor (.tsv format)' /> 20 <param name='datafile' type='data' format='csv,tabular' multiple='true' label='Upload data that has been corrected by Isocor (.tsv format)' />
21 <param name='template_file' type='data' format='csv, xlsx' multiple='true' label='Upload template file containing plot metadata (.xlsx format)' argument='--template'/> 21 <param name='template_file' type='data' format='csv,xlsx' multiple='true' label='Upload template file containing plot metadata (.xlsx format)' argument='--template'/>
22 <!--param name='run_name' type='text' label='Run name' /--> 22 <!--param name='run_name' type='text' label='Run name' /-->
23 <param name='format' type='select' label='Plot format'> 23 <param name='format' type='select' label='Plot format'>
24 <option value='pdf'>pdf</option> 24 <option value='pdf'>pdf</option>
25 <option value='jpeg'>jpeg</option> 25 <option value='jpeg'>jpeg</option>
26 <option value='png'>png</option> 26 <option value='png'>png</option>