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planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics commit eba1150dad55ad9eca5e93358d9f75e6b6dba2ec
author workflow4metabolomics
date Wed, 10 Jul 2024 15:20:11 +0000
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c577f13705f2 planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics commit eba1150dad55ad9eca5e93358d9f75e6b6dba2ec
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1 # W4M concatenate
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4 Metadata
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5 -----------
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7 * **@name**: W4M concatenate
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8 * **@galaxyID**: W4Mconcatenate
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9 * **@version**: 1.0.0
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10 * **@authors**: Original code: Hanane Nourine (Intern - PFEM - INRAE) - Maintainer: Melanie Petera (PFEM - INRAE - MetaboHUB)
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11 * **@init date**: 2024, May
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12 * **@main usage**: This tool enables the concatenation of two matrices of Metadata and returns a matrix of Metadata and two DataMatrix
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c577f13705f2 planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics commit eba1150dad55ad9eca5e93358d9f75e6b6dba2ec
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15 Context
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16 -----------
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18 This tool is provided as one of the [Workflow4Metabolomics](http://workflow4metabolomics.org) Galaxy instance data handling tools.
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19 W4M is an international infrastructure providing software tools to process, analyse and annotate metabolomics data.
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21 User interface is based on the Galaxy platform (homepage: https://galaxyproject.org/). It is an open, web-based platform for data intensive biomedical research.
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22 Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses.
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24 The tool was created as part of a Master's level internship.
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26 Configuration
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27 -----------
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29 ### Requirement:
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30 * R software: version = 4.3.3 recommended
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31 * r-dplyr = 1.1.4
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32 * r-w4mrutils = 1.0.0
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34 Technical description
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35 -----------
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37 Main files:
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39 - concatenation.R: R function (core script)
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40 - fonctions_auxiliaires.R : R auxiliary functions.
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41 - concatenation_wrapper.R: R script to link the main R function to inputs
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42 - concat.xml: XML wrapper (interface for Galaxy)
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45 Services provided
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46 -----------
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48 * Help and support: https://community.france-bioinformatique.fr/c/workflow4metabolomics/10
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52 License
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53 -----------
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55 * Cea Cnrs Inria Logiciel Libre License, version 2.1 (CECILL-2.1)