Mercurial > repos > workflow4metabolomics > w4mconcatenate
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| author | workflow4metabolomics |
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| date | Wed, 10 Jul 2024 15:20:11 +0000 |
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| 1 # W4M concatenate | |
| 2 | |
| 3 | |
| 4 Metadata | |
| 5 ----------- | |
| 6 | |
| 7 * **@name**: W4M concatenate | |
| 8 * **@galaxyID**: W4Mconcatenate | |
| 9 * **@version**: 1.0.0 | |
| 10 * **@authors**: Original code: Hanane Nourine (Intern - PFEM - INRAE) - Maintainer: Melanie Petera (PFEM - INRAE - MetaboHUB) | |
| 11 * **@init date**: 2024, May | |
| 12 * **@main usage**: This tool enables the concatenation of two matrices of Metadata and returns a matrix of Metadata and two DataMatrix | |
| 13 | |
| 14 | |
| 15 Context | |
| 16 ----------- | |
| 17 | |
| 18 This tool is provided as one of the [Workflow4Metabolomics](http://workflow4metabolomics.org) Galaxy instance data handling tools. | |
| 19 W4M is an international infrastructure providing software tools to process, analyse and annotate metabolomics data. | |
| 20 | |
| 21 User interface is based on the Galaxy platform (homepage: https://galaxyproject.org/). It is an open, web-based platform for data intensive biomedical research. | |
| 22 Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses. | |
| 23 | |
| 24 The tool was created as part of a Master's level internship. | |
| 25 | |
| 26 Configuration | |
| 27 ----------- | |
| 28 | |
| 29 ### Requirement: | |
| 30 * R software: version = 4.3.3 recommended | |
| 31 * r-dplyr = 1.1.4 | |
| 32 * r-w4mrutils = 1.0.0 | |
| 33 | |
| 34 Technical description | |
| 35 ----------- | |
| 36 | |
| 37 Main files: | |
| 38 | |
| 39 - concatenation.R: R function (core script) | |
| 40 - fonctions_auxiliaires.R : R auxiliary functions. | |
| 41 - concatenation_wrapper.R: R script to link the main R function to inputs | |
| 42 - concat.xml: XML wrapper (interface for Galaxy) | |
| 43 | |
| 44 | |
| 45 Services provided | |
| 46 ----------- | |
| 47 | |
| 48 * Help and support: https://community.france-bioinformatique.fr/c/workflow4metabolomics/10 | |
| 49 | |
| 50 | |
| 51 | |
| 52 License | |
| 53 ----------- | |
| 54 | |
| 55 * Cea Cnrs Inria Logiciel Libre License, version 2.1 (CECILL-2.1) |