Mercurial > repos > xiaoyi-cao > annotatebed
comparison annotateBedWrapper.xml @ 5:39fa27e915bf draft
Uploaded
| author | xiaoyi-cao |
|---|---|
| date | Sun, 02 Dec 2012 14:47:12 -0500 |
| parents | d022f9da02c7 |
| children | 133b692c999c |
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| 4:d022f9da02c7 | 5:39fa27e915bf |
|---|---|
| 5 <command> | 5 <command> |
| 6 bedtools annotate | 6 bedtools annotate |
| 7 $countflag | 7 $countflag |
| 8 -i '$inputRegion' | 8 -i '$inputRegion' |
| 9 -names | 9 -names |
| 10 #for $s in enumerate($annotateColumn) | 10 #for $i, $s in enumerate($annotateColumn) |
| 11 ${s.colname} | 11 ${s.colname} |
| 12 #end for | 12 #end for |
| 13 -files | 13 -files |
| 14 #for $s in enumerate($annotateColumn) | 14 #for $i, $s in enumerate($annotateColumn) |
| 15 ${s.colfile} | 15 ${s.colfile} |
| 16 #end for | 16 #end for |
| 17 > '$output' | 17 > '$output' |
| 18 </command> | 18 </command> |
| 19 | 19 |