comparison hexrd_find_orientations.xml @ 8:4bb02acaaabc draft

"planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hexrd commit 15bca193042c05f262db5cb1efe70e2cbd567615-dirty"
author ximgchess
date Thu, 20 Jan 2022 17:56:47 +0000
parents baba452d0613
children a35bda7ed678
comparison
equal deleted inserted replaced
7:baba452d0613 8:4bb02acaaabc
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 cp '$config_yml' $config && 8 cp '$config_yml' $config &&
9 cp '$config_yml' config.yml && 9 cp '$config_yml' config.yml &&
10 ## symlink input files 10 ## symlink input files
11 @CMD_LINKS@ 11 @CMD_LINKS@
12 hexrd find-orientations config.yml && 12 hexrd find-orientations --clean config.yml &&
13 @CONVERT2TAB@ && 13 @CONVERT2TAB@ &&
14 cp find-orientations_analysis_*.log '$log' && 14 cp find-orientations_analysis_*.log '$log' &&
15 cp accepted_orientations_analysis_*.dat '$accepted_orientations' && 15 cp accepted_orientations_analysis_*.dat '$accepted_orientations' &&
16 cp scored_orientations_analysis_*.npz '$score_orientations' && 16 cp scored_orientations_analysis_*.npz '$score_orientations' &&
17 cp analysis_*_eta-ome_maps.npz '$ome_maps' 17 cp analysis_*_eta-ome_maps.npz '$ome_maps'