Mercurial > repos > ximgchess > hexrd
comparison hexrd_find_orientations.xml @ 8:4bb02acaaabc draft
"planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hexrd commit 15bca193042c05f262db5cb1efe70e2cbd567615-dirty"
author | ximgchess |
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date | Thu, 20 Jan 2022 17:56:47 +0000 |
parents | baba452d0613 |
children | a35bda7ed678 |
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7:baba452d0613 | 8:4bb02acaaabc |
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7 <command detect_errors="exit_code"><![CDATA[ | 7 <command detect_errors="exit_code"><![CDATA[ |
8 cp '$config_yml' $config && | 8 cp '$config_yml' $config && |
9 cp '$config_yml' config.yml && | 9 cp '$config_yml' config.yml && |
10 ## symlink input files | 10 ## symlink input files |
11 @CMD_LINKS@ | 11 @CMD_LINKS@ |
12 hexrd find-orientations config.yml && | 12 hexrd find-orientations --clean config.yml && |
13 @CONVERT2TAB@ && | 13 @CONVERT2TAB@ && |
14 cp find-orientations_analysis_*.log '$log' && | 14 cp find-orientations_analysis_*.log '$log' && |
15 cp accepted_orientations_analysis_*.dat '$accepted_orientations' && | 15 cp accepted_orientations_analysis_*.dat '$accepted_orientations' && |
16 cp scored_orientations_analysis_*.npz '$score_orientations' && | 16 cp scored_orientations_analysis_*.npz '$score_orientations' && |
17 cp analysis_*_eta-ome_maps.npz '$ome_maps' | 17 cp analysis_*_eta-ome_maps.npz '$ome_maps' |