Mercurial > repos > ximgchess > hexrd
changeset 8:4bb02acaaabc draft
"planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hexrd commit 15bca193042c05f262db5cb1efe70e2cbd567615-dirty"
| author | ximgchess |
|---|---|
| date | Thu, 20 Jan 2022 17:56:47 +0000 |
| parents | baba452d0613 |
| children | e67ad9795525 |
| files | hexrd_find_orientations.xml macros.xml |
| diffstat | 2 files changed, 7 insertions(+), 7 deletions(-) [+] |
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--- a/hexrd_find_orientations.xml Tue Jan 04 22:07:42 2022 +0000 +++ b/hexrd_find_orientations.xml Thu Jan 20 17:56:47 2022 +0000 @@ -9,7 +9,7 @@ cp '$config_yml' config.yml && ## symlink input files @CMD_LINKS@ - hexrd find-orientations config.yml && + hexrd find-orientations --clean config.yml && @CONVERT2TAB@ && cp find-orientations_analysis_*.log '$log' && cp accepted_orientations_analysis_*.dat '$accepted_orientations' &&
--- a/macros.xml Tue Jan 04 22:07:42 2022 +0000 +++ b/macros.xml Thu Jan 20 17:56:47 2022 +0000 @@ -1,6 +1,6 @@ <macros> - <token name="@TOOL_VERSION@">0.8.12</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@TOOL_VERSION@">0.8.17</token> + <token name="@VERSION_SUFFIX@">0</token> <token name="@PROFILE@">21.09</token> <xml name="requirements"> <requirements> @@ -150,7 +150,7 @@ <!-- active_hkls should be able to be optional="true" --> <param name="active_hkls" type="text" value="" label="active hkl planes"> <help>commas separated list of planes, e.g.: 0,1,2,3,4,5</help> - <validator type="regex" message="plane indeces separated by commas">^\d(,\d)*$</validator> + <validator type="regex" message="plane indices separated by commas">^\d(,\d)*$</validator> </param> </section> <param name="on_map_threshold" type="integer" value="1" min="1" label="on-map threshold used in the scoring"/> @@ -312,8 +312,8 @@ <param name="eta" type="float" value="" min="0" label="eta"/> <param name="omega" type="float" value="" min="0" label="omega"/> </repeat> - <param name="refit" type="text" value="1" label="refit"> - <validator type="regex" message="">^\d(,\d)*$</validator> + <param name="refit" type="text" value="1" label="refit" help="float values separated by commas"> + <validator type="regex" message="">^[+-]?(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?(,[+-]?(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?)*$</validator> </param> <conditional name="max_tth"> <param name="tth_max_value" type="select" label="Set tth_max"> @@ -345,7 +345,7 @@ #set $tth = [] #set $eta = [] #set $omega = [] -#set refit = '[' + str($tolerance.refit) + ']' +#set $refit = '[' + str($tolerance.refit) + ']' #for $tol in $tolerance.tolerance_lists #silent $tth.append(float($tol.tth)) #silent $eta.append(float($tol.eta))