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1 <tool id="memelogo" name="motif logo">
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2 <description>of MEME motif</description>
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3 <command>ceqlogo -i $input -o tmp.eps -t $title -x ''
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4 && ps2pdf -dEPSCrop tmp.eps $output
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5 </command>
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6 <inputs>
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7 <param name="input" type="data" format="txt" label="MEME motif file"/>
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8 <param name="title" type='text' size="50" label="Title" value="motif1"/>
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9 </inputs>
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10 <outputs>
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11 <data format="pdf" name="output" />
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12 </outputs>
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13 <help>
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14
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15 **Description**
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16
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17 Generate sequence logo for MEME motif file. See details here:
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18
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19 http://meme.sdsc.edu/meme/doc/ceqlogo.html
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20
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21 **Example output**
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22
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23 .. image:: ./static/images/memelogo.png
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24
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25 </help>
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26 </tool>
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