Mercurial > repos > xuebing > sharplab_seq_motif

comparison mytools/match.xml @ 6:7e14dac65e49

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author xuebing
date Fri, 16 Mar 2012 14:03:59 -0400
parents 7cc64021dc90
children
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5:84e2c77a6abd 6:7e14dac65e49
36 CGATGCTAGCTAGCTAGCTACGTAGCTAGCTAGTCGATGCTAGCTAGCTA 36 CGATGCTAGCTAGCTAGCTACGTAGCTAGCTAGTCGATGCTAGCTAGCTA
37 ATGCTAGCTAGC.... 37 ATGCTAGCTAGC....
38 38
39 Output (bed):: 39 Output (bed)::
40 40
41 chr11 72790893 72790902 ACTTAACTG 1 - antisense 5ss,G4T:CAGTTAAGT-rc hg18_chr11_727 41 chr11 72790893 72790902 ACTTAACTG 1 - antisense 5ss,G4T:CAGTTAAGT-rc hg18_chr11_72790846_72791902_+ 47
42 90846_72791902_+ 47 42 chr11 72791880 72791889 CAGGTAAGA 1 + sense 5ss,T9A:CAGGTAAGA hg18_chr11_72790846_72791902_+ 1034
43 chr11 72791880 72791889 CAGGTAAGA 1 + sense 5ss,T9A:CAGGTAAGA hg18_chr11_72790846_72
44 791902_+ 1034
45 43
46 44
47 Output (tab):: 45 Output (tab)::
48 46
49 Tmod4 802 5ss:CAGGTAAGT-rc ACTTACCTG 47 Tmod4 802 5ss:CAGGTAAGT-rc ACTTACCTG