annotate makewindow.xml @ 12:2f4ea569f048

Uploaded
author xuebing
date Sat, 10 Mar 2012 08:10:44 -0500
parents b7f1d9f8f3bc
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
1 <tool id="makewindow" name="make-window">
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
2 <description>around interval center </description>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
3 <command interpreter="python"> makewindow.py $input $output $window </command>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
4 <inputs>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
5 <param name="input" type="data" format="interval" label="Input interval file"/>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
6 <param name="window" type="integer" value="1000" label="window size (bps)" />
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
7 </inputs>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
8 <outputs>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
9 <data format="input" name="output" />
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
10 </outputs>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
11 <help>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
12
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
13 **Description**
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
14
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
15 For each interval in the input file, take the middle point, then extend each side windowsize/2 bps.
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
16
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
17 </help>
b7f1d9f8f3bc Uploaded
xuebing
parents:
diff changeset
18 </tool>