comparison tools/data_source/cbi_rice_mart.xml @ 0:9071e359b9a3

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author xuebing
date Fri, 09 Mar 2012 19:37:19 -0500
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-1:000000000000 0:9071e359b9a3
1 <?xml version="1.0"?>
2 <!--
3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
6 -->
7 <tool name="CBI Rice Mart" id="cbi_rice_mart" tool_type="data_source" version="1.0.1">
8 <description>rice mart</description>
9 <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
10 <inputs action="http://ricemart.cbi.edu.cn/biomart/martview/" check_values="false" method="get" target="_top">
11 <display>go to RMap rice mart $GALAXY_URL</display>
12 <param name="GALAXY_URL" type="baseurl" value="/tool_runner/biomart" />
13 </inputs>
14 <request_param_translation>
15 <request_param galaxy_name="URL" remote_name="URL" missing="">
16 <append_param separator="&amp;" first_separator="?" join="=">
17 <value name="_export" missing="1" />
18 <value name="GALAXY_URL" missing="0" />
19 </append_param>
20 </request_param>
21 <request_param galaxy_name="data_type" remote_name="exportView_outputformat" missing="tabular" >
22 <value_translation>
23 <value galaxy_value="tabular" remote_value="TSV" />
24 </value_translation>
25 </request_param>
26 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="get" />
27 <request_param galaxy_name="dbkey" remote_name="dbkey" missing="?" />
28 <request_param galaxy_name="organism" remote_name="organism" missing="" />
29 <request_param galaxy_name="table" remote_name="table" missing="" />
30 <request_param galaxy_name="description" remote_name="description" missing="" />
31 <request_param galaxy_name="name" remote_name="name" missing="Rice mart query" />
32 <request_param galaxy_name="info" remote_name="info" missing="" />
33 </request_param_translation>
34 <uihints minwidth="800"/>
35 <outputs>
36 <data name="output" format="tabular" />
37 </outputs>
38 <options sanitize="False" refresh="True"/>
39 </tool>