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comparison tools/emboss_5/emboss_geecee.xml @ 0:9071e359b9a3

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author xuebing
date Fri, 09 Mar 2012 19:37:19 -0500
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1 <tool id="EMBOSS: geecee41" name="geecee" version="5.0.0">
2 <description>Calculates fractional GC content of nucleic acid sequences</description>
3 <requirements><requirement type="package" version="5.0.0">emboss</requirement></requirements>
4 <command>geecee -sequence $input1 -outfile $out_file1 -auto</command>
5 <inputs>
6 <param format="data" name="input1" type="data">
7 <label>Sequences</label>
8 </param>
9 </inputs>
10 <outputs>
11 <data format="geecee" name="out_file1" />
12 </outputs>
13 <tests>
14 <test>
15 <param name="input1" value="2.fasta"/>
16 <output name="out_file1" file="emboss_geecee_out.geecee"/>
17 </test>
18 </tests>
19 <help>
20 You can view the original documentation here_.
21
22 .. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/geecee.html
23 </help>
24 </tool>