Mercurial > repos > xuebing > sharplabtool
comparison metaintv_ext.xml @ 11:b7f1d9f8f3bc
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| author | xuebing |
|---|---|
| date | Sat, 10 Mar 2012 07:59:27 -0500 |
| parents | |
| children |
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| 10:1558594a3c2e | 11:b7f1d9f8f3bc |
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| 1 <tool id="metaintv_ext" name="aggregrate binned-average"> | |
| 2 <description>from bigwig (allow extension)</description> | |
| 3 <command interpreter="python">metaintv_ext.py $bwfile $intvfile $exts $nbins $outfile $outplot > $outlog </command> | |
| 4 <inputs> | |
| 5 <param name="intvfile" format="interval" type="data" label="Interval file"/> | |
| 6 <param name="bwfile" format="bigwig" type="data" label="BigWig file"/> | |
| 7 <param name="exts" type="text" size="80" value="100,50,50,100" label="extensions"/> | |
| 8 <param name="nbins" type="text" size="80" value="10,10,10" label="number of bins"/> | |
| 9 | |
| 10 </inputs> | |
| 11 <outputs> | |
| 12 <data format="txt" name="outlog" label="${tool.name} on ${on_string}[log]"/> | |
| 13 <data format="tabular" name="outfile" label="${tool.name} on ${on_string}[data]"/> | |
| 14 <data format="pdf" name="outplot" label="${tool.name} on ${on_string}[plot]"/> | |
| 15 </outputs> | |
| 16 <help> | |
| 17 | |
| 18 .. class:: infomark | |
| 19 | |
| 20 To be added | |
| 21 | |
| 22 </help> | |
| 23 </tool> |