Mercurial > repos > xuebing > sharplabtool

comparison mytools/makewindow.py @ 7:f0dc65e7f6c0

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author xuebing
date Fri, 09 Mar 2012 19:59:07 -0500
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6:094f377db4e5 7:f0dc65e7f6c0
1 def makeWindow(filename,outfile,window):
2 window = window/2
3 f=open(filename)
4 out = open(outfile,'w')
5 for line in f:
6 flds = line.strip().split()
7 #new position
8 center = (int(flds[1]) + int(flds[2]))/2
9 start = center - window
10 end = center + window
11 if start >= 0:
12 flds[1] = str(start)
13 flds[2] = str(end)
14 out.write('\t'.join(flds)+'\n')
15 f.close()
16 out.close()
17
18 import sys
19 makeWindow(sys.argv[1],sys.argv[2],int(sys.argv[3]))