comparison metaintv_ext.xml @ 14:76e1b1b21cce default tip

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author xuebing
date Tue, 13 Mar 2012 19:05:10 -0400
parents 292186c14b08
children
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13:292186c14b08 14:76e1b1b21cce
1 <tool id="metaintv_ext" name="aggregrate binned-average">
2 <description>from bigwig (allow extension)</description>
3 <command interpreter="python">metaintv_ext.py $bwfile $intvfile $exts $nbins $outfile $outplot > $outlog </command>
4 <inputs>
5 <param name="intvfile" format="interval" type="data" label="Interval file"/>
6 <param name="bwfile" format="bigwig" type="data" label="BigWig file"/>
7 <param name="exts" type="text" size="80" value="100,50,50,100" label="extensions"/>
8 <param name="nbins" type="text" size="80" value="10,10,10" label="number of bins"/>
9
10 </inputs>
11 <outputs>
12 <data format="txt" name="outlog" label="${tool.name} on ${on_string}[log]"/>
13 <data format="tabular" name="outfile" label="${tool.name} on ${on_string}[data]"/>
14 <data format="pdf" name="outplot" label="${tool.name} on ${on_string}[plot]"/>
15 </outputs>
16 <help>
17
18 .. class:: infomark
19
20 To be added
21
22 </help>
23 </tool>