Mercurial > repos > xuebing > sharplabtool
diff mytools/metaintv_ext.xml @ 9:87eb5c5ddfe9
Uploaded
author | xuebing |
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date | Fri, 09 Mar 2012 20:01:43 -0500 |
parents | f0dc65e7f6c0 |
children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/mytools/metaintv_ext.xml Fri Mar 09 20:01:43 2012 -0500 @@ -0,0 +1,23 @@ +<tool id="metaintv_ext" name="aggregrate binned-average"> + <description>from bigwig (allow extension)</description> + <command interpreter="python">metaintv_ext.py $bwfile $intvfile $exts $nbins $outfile $outplot > $outlog </command> + <inputs> + <param name="intvfile" format="interval" type="data" label="Interval file"/> + <param name="bwfile" format="bigwig" type="data" label="BigWig file"/> + <param name="exts" type="text" size="80" value="100,50,50,100" label="extensions"/> + <param name="nbins" type="text" size="80" value="10,10,10" label="number of bins"/> + + </inputs> + <outputs> + <data format="txt" name="outlog" label="${tool.name} on ${on_string}[log]"/> + <data format="tabular" name="outfile" label="${tool.name} on ${on_string}[data]"/> + <data format="pdf" name="outplot" label="${tool.name} on ${on_string}[plot]"/> + </outputs> + <help> + +.. class:: infomark + +To be added + +</help> +</tool>