Mercurial > repos > xuebing > sharplabtool
diff tools/data_source/yeastmine.xml @ 0:9071e359b9a3
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author | xuebing |
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date | Fri, 09 Mar 2012 19:37:19 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/data_source/yeastmine.xml Fri Mar 09 19:37:19 2012 -0500 @@ -0,0 +1,20 @@ +<?xml version="1.0"?> +<tool name="YeastMine" id="yeastmine" tool_type="data_source"> + <description>server</description> + <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command> + <inputs action="http://yeastmine.yeastgenome.org/yeastmine/begin.do" check_values="false" method="get"> + <display>go to yeastMine server $GALAXY_URL</display> + </inputs> + <request_param_translation> + <request_param galaxy_name="data_type" remote_name="data_type" missing="auto" > + <value_translation> + <value galaxy_value="auto" remote_value="txt" /> <!-- intermine currently always provides 'txt', make this auto detect --> + </value_translation> + </request_param> + </request_param_translation> + <uihints minwidth="800"/> + <outputs> + <data name="output" format="txt" /> + </outputs> + <options sanitize="False" refresh="True"/> +</tool>