Mercurial > repos > xuebing > sharplabtool

diff tools/mytools/AATAAA.motif @ 0:9071e359b9a3

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author xuebing
date Fri, 09 Mar 2012 19:37:19 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/mytools/AATAAA.motif	Fri Mar 09 19:37:19 2012 -0500
@@ -0,0 +1,19 @@
+MEME version 4.4
+
+ALPHABET= ACGT
+
+strands: + -
+
+Background letter frequencies (from uniform background):
+A 0.25000 C 0.25000 G 0.25000 T 0.25000 
+
+MOTIF AATAAA 
+
+letter-probability matrix: alength= 4 w= 6 nsites= 20 E= 0
+  1.000000	  0.000000	  0.000000	  0.000000	
+  1.000000	  0.000000	  0.000000	  0.000000	
+  0.000000	  0.000000	  0.000000	  1.000000	
+  1.000000	  0.000000	  0.000000	  0.000000	
+  1.000000	  0.000000	  0.000000	  0.000000	
+  1.000000	  0.000000	  0.000000	  0.000000	
+