--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/mytools/cdf-old-not-used/cdf.xml	Fri Mar 09 19:37:19 2012 -0500
@@ -0,0 +1,21 @@
+<tool id="cdf" name="CDF">
+  <description>plot of two columns</description>
+  <command interpreter="python">cdf.py $input $output $columns $log $labels $title </command>
+  <inputs>
+    <param name="input" format="tabular" type="data" label="input file"/>
+    <param name="columns" size="4" type="text" label="column numbers (sep by comma)" help="i.e. plot CDF for data in column 2 and 3" value="2,3"/>
+    <param name="title" size="50" type="text" label="Figure title (no space allowed)" value="CDF-plot"/>
+    <param name="labels" size="50" type="text" label="Figure legend (sep by comma,no space allowed)" value="sample,control"/>
+    <param name="log" label="log transform the data" type="boolean" truevalue="log" falsevalue="none" checked="False"/>
+  </inputs>
+  <outputs>
+    <data format="pdf" name="output" />
+  </outputs>
+  <help>
+
+**What it does**
+
+This tool plots the CDF of two data columns in the input file. A KS test p-value is also shown. 
+
+  </help>
+</tool>