diff revcompl.xml @ 14:76e1b1b21cce default tip

Deleted selected files
author xuebing
date Tue, 13 Mar 2012 19:05:10 -0400
parents 292186c14b08
children
line wrap: on
line diff
--- a/revcompl.xml	Sat Mar 10 08:17:36 2012 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,41 +0,0 @@
-<tool id="revcompl" name="reverse complement">
-  <description>of DNA/RNA sequences</description>
-  <command interpreter="python">revcompl.py $input $output $fasta $rna </command>
-  <inputs>
-    <param name="input" format="txt" type="data" label="Original sequence file"/>
-    <param name="fasta" label="Check if input is fasta format" type="boolean" truevalue="fasta" falsevalue="txt" checked="False"/>
-    <param name="rna" label="Check if need to output as RNA sequences" type="boolean" truevalue="rna" falsevalue="dna" checked="False"/>
-  </inputs>
-  <outputs>
-    <data format="input" name="output" />
-  </outputs>
-  <help>
-
-**What it does**
-
-This tool outputs reverse complementary of DNA/RNA sequences in the input file. The input can be fasta format or raw sequences (each line is a sequence).
-
-Degenerate nucleotides are supported. Here is the match table:
-
-A to T/U
-
-C to G
-
-G to C
-
-T/U to A
-
-M to K
-
-W to W
-
-S to S
-
-R to Y
-
-Y to R
-
-N to N
-
-  </help>
-</tool>