--- a/seq2meme.xml	Sat Mar 10 08:17:36 2012 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,21 +0,0 @@
-<tool id="seq2meme" name="create-motif-file">
-  <description>from fasta file</description>
-  <command interpreter="python">seq2meme.py $input $output $motifName $psuedocont $background </command>
-  <inputs>
-     <param name="input" type="data" format="txt" label="Sequence file" help="all sequences should be the same length"/>    
-      <param name="motifName" size="20" type="text" value="motif1" label="Motif name (no space allowed)"/>
-      <param name="psuedocont" size="10" type="float" value="1.0" label="Psuedocount"/>
-    <param name="background" size="40" type="text" value="A,0.25,C,0.25,G,0.25,T,0.25" label="Background frequency"/>
-  </inputs>
-  <outputs>
-    <data format="txt" name="output" label="$motifName-meme"/>
-  </outputs>
-  <help>
-
-**Description**
-
-Generate a MEME motif format file from a set of sequences. Input could be raw sequences (one sequence per line) or fasta format (one identifier line and one sequence line).
-
-
-  </help>
-</tool>