Mercurial > repos > xuebing > sharplabtool
view tools/emboss_5/emboss_single_outputfile_wrapper.pl @ 0:9071e359b9a3
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author | xuebing |
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date | Fri, 09 Mar 2012 19:37:19 -0500 |
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#! /usr/bin/perl -w use strict; use File::Copy; my $cmd_string = join (" ",@ARGV); my $results = `$cmd_string`; my @files = split("\n",$results); my $fileNameOut = $ARGV[6]; my ($drive, $outputDir, $file) = File::Spec->splitpath( $fileNameOut ); my $destination = $fileNameOut; foreach my $thisLine (@files) { if ($thisLine =~ /Created /) { $thisLine =~ /[\w|\.]+$/; $thisLine =$&; #print "outfile: $thisLine\n"; #there is only one file to move, so we can quit after finding it move($drive.$outputDir.$thisLine,$fileNameOut); exit(1); } else { print $thisLine,"\n"; } }