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planemo upload commit 7624082bc86d63e7a63cc72a75287b7b7408678d-dirty
author yating-l
date Mon, 10 Jul 2017 12:43:51 -0400
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-1:000000000000 0:c440273bd845
1 <macros>
2 <xml name="requirements_twobit">
3 <requirements>
4 <requirement type="package" version="340">ucsc_twobit</requirement>
5 <yield />
6 </requirements>
7 </xml>
8 <xml name="environment_LC_COLLATE">
9 <environment_variables>
10 <!-- Sort uppercase letters before lowercase (required by UCSC tools) -->
11 <environment_variable name="LC_COLLATE">C</environment_variable>
12 <yield />
13 </environment_variables>
14 </xml>
15 <xml name="citations">
16 <citations>
17 <citation type="bibtex">
18 @article{Kent01062002,
19 author = {Kent, W. James and Sugnet, Charles W. and Furey, Terrence S. and Roskin, Krishna M. and Pringle, Tom H. and Zahler, Alan M. and Haussler, and David},
20 title = {The Human Genome Browser at UCSC},
21 volume = {12},
22 number = {6},
23 pages = {996-1006},
24 year = {2002},
25 doi = {10.1101/gr.229102},
26 URL = {http://genome.cshlp.org/content/12/6/996.abstract},
27 eprint = {http://genome.cshlp.org/content/12/6/996.full.pdf+html},
28 journal = {Genome Research}
29 }
30 </citation>
31 <yield />
32 </citations>
33 </xml>
34
35 <token name="@OPTIONAL_PARAM_FUNC@">
36 <![CDATA[
37 #def optional_param($_flag, $_flag_value, $_sep="=")
38 #if str($_flag_value) and str($_flag_value).strip():
39 ${_flag}${_sep}${_flag_value}
40 #end if
41 #end def
42 ]]>
43 </token>
44 </macros>