Mercurial > repos > yating-l > jbrowsearchivecreator

diff macros.xml @ 6:237707a6b74d draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit a500f7ab2119cc5faaf80393bd87428389d06880-dirty
author yating-l
date Thu, 15 Feb 2018 17:05:05 -0500
parents
children 5d5fdcb798da
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Thu Feb 15 17:05:05 2018 -0500
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+<macros>
+    <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common">
+        <extra_files type="directory" value="myHub/@GENOME@/names" compare="re_match"/>
+        <extra_files type="directory" value="myHub/@GENOME@/seq" compare="re_match"/>
+        <extra_files type="directory" value="myHub/@GENOME@/tracks" compare="re_match"/>
+        <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
+        <extra_files type="file" name="myHub/@GENOME@/tracks.conf" value="@TEST@/myHub/@GENOME@/tracks.conf" />
+        <extra_files type="file" name="myHub/@GENOME@/trackList.json">
+            <assert_contents>
+                <has_text text="tracks"/>
+                <has_text text="css"/>
+                <has_text text="names"/>
+                <has_text text="formatVersion"/>
+            </assert_contents>
+        </extra_files>
+    </xml>
+
+    <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common">
+        <extra_files type="file" name="myHub/@GENOME@/trackList.json" >
+            <assert_contents>
+                <has_text text="tracks"/>
+                <has_text text="css"/>
+                <has_text text="names"/>
+                <has_text text="formatVersion"/>
+            </assert_contents>
+        </extra_files>
+        <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
+    </xml>
+
+    
+
+</macros>
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