Mercurial > repos > yating-l > jbrowsearchivecreator
diff spliceJunctions.as @ 6:237707a6b74d draft
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit a500f7ab2119cc5faaf80393bd87428389d06880-dirty
author | yating-l |
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date | Thu, 15 Feb 2018 17:05:05 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/spliceJunctions.as Thu Feb 15 17:05:05 2018 -0500 @@ -0,0 +1,17 @@ +table spliceJunctions +"Predicted splice junctions" + ( + string chrom; "Reference sequence chromosome or scaffold" + uint chromStart; "Start position in chromosome" + uint chromEnd; "End position in chromosome" + string name; "Name of item" + uint score; "Score from 0-1000" + char[1] strand; "+ or -" + uint thickStart; "Start of where display should be thick (start codon)" + uint thickEnd; "End of where display should be thick (stop codon)" + uint reserved; "Used as itemRgb as of 2004-11-22" + int blockCount; "Number of blocks" + int[blockCount] blockSizes; "Comma separated list of block sizes" + int[blockCount] chromStarts; "Start positions relative to chromStart" + uint junctionScore; "Number of reads supporting the splice junction" + )