Mercurial > repos > yating-l > package_ucsc_gcpercent_340

comparison tool_dependencies.xml @ 0:60da990356c3 draft

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planemo upload
author yating-l
date Tue, 16 May 2017 15:38:45 -0400
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children dd6a70b36193
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-1:000000000000 0:60da990356c3
1 <?xml version="1.0" ?>
2 <tool_dependency>
3 <package name="ucsc_gcpercent" version="340">
4 <install version="1.0">
5 <actions_group>
6 <actions os="darwin" architecture="x86_64">
7 <action type="download_by_url"
8 sha256sum="e74387b8ca9d9acac30b2fac278d7bebd38b568575ed4413f491002cd0747cae">
9 http://old-gep.wustl.edu/~wilson/packages/ucsc_gcpercent/ucsc_gcpercent_340_macOS_x86_64.tar.gz
10 </action>
11 <action type="move_directory_files">
12 <source_directory>bin</source_directory>
13 <destination_directory>$INSTALL_DIR/bin</destination_directory>
14 </action>
15 </actions>
16
17 <actions os="linux" architecture="x86_64">
18 <action type="download_by_url"
19 sha256sum="e44479e413082b940e6cd2b89fbe5e461a4a422ded4c75bdc3afe938dd952acc">
20 http://old-gep.wustl.edu/~wilson/packages/ucsc_gcpercent/ucsc_gcpercent_340_linux_x86_64.tar.gz
21 </action>
22 <action type="move_directory_files">
23 <source_directory>bin</source_directory>
24 <destination_directory>$INSTALL_DIR/bin</destination_directory>
25 </action>
26 </actions>
27
28 <!-- Display error message for unsupported OS and CPU architecture -->
29 <actions>
30 <action type="shell_command">
31 echo "ERROR: This package only supports 64-bit systems running macOS or Linux"
32 </action>
33 <action type="shell_command">false</action>
34 </actions>
35
36 <!-- update $PATH environment variable -->
37 <action type="set_environment">
38 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
39 </action>
40 </actions_group>
41 </install>
42 <readme>
43 <![CDATA[
44 This package contains the hgGcPercent tool for constructing the
45 `GC percent <http://genomewiki.ucsc.edu/index.php/Browser_Track_Construction#GC_Percent>`_
46 evidence track. This tool was created by the
47 `Genome Bioinformatics Group <https://genome.ucsc.edu/staff.html>`_
48 at the UCSC Genomics Institute.
49 ]]>
50 </readme>
51 </package>
52 </tool_dependency>